Publications ·

This is a list of papers published in journals and conferences.

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A novel bio-inspired encoding for evolving cryptographic Boolean functions. R. A., G. Bernardini, L. Manzoni, G. Pietropolli. In: Swarm and Evolutionary Computation, 2026. link
Pattern matching with Elastic-Degenerate strings and Elastic-Founder graphs. R. A., G. Bernardini, A. Conte, M. Equi, E. Gabory, R. Grossi, N. Pisanti. In: Algorithms for Molecular Biology, 2026. link
Cycles and Global Attractors of Reactantless and Inhibitorless Reaction Systems. R. A., G. Bernardini, L. Manzoni. In: Theoretical Computer Science, 2025. link
Chemical pure reaction automata in maximally parallel manner. R. A., G. Bernardini, F. Leiter, L. Manzoni. In: Journal of Membrane Computing, 2025. link
Pure Reaction Automata. R. A., G. Bernardini, E. Formenti, F. Leiter, L. Manzoni. In: Natural Computing, 2024. link
Fixed points and attractors of additive reaction systems. R. A., G. Bernardini, L. Manzoni. In: Natural Computing, 2024. link
Fixed points and attractors of reactantless and inhibitorless reaction systems. R. A., G. Bernardini, L. Manzoni. In: Theoretical Computer Science, 2024. link

Evolving Cryptographic Boolean Functions with Reaction Systems. R. A., L. Mariot, L. Manzoni, G. Pietropolli. In: The Genetic and Evolutionary Computation Conference (GECCO 2025). link
A unifying taxonomy of pattern matching in degenerate strings and founder graphs. R. A., G. Bernardini, A. Conte, M. Equi, E. Gabory, R. Grossi, N. Pisanti. In: 24th International Workshop on Algorithms in Bioinformatics (WABI 2024). link
Chemical Pure Reaction Automata in Maximally Parallel Manner. R. A., G. Bernardini, F. Leiter, L. Manzoni. In: 25th Conference on Membrane Computing (CMC 2024). full version